Non-rigid motion correction toolbox

Usage scenarios

  • Between different measurement sessions: chronic imaging

  • Within one measurement session: movement artefact correction


  • Utilizes all CPU cores of the data processing computer
  • Optionally preprocesses the template image and the time series images
  • Reads and writes the native MESc file format of Femtonics microscopes
  • Can process measurements of arbitrary length
  • Coming soon:
    • extension with new optional algorithms